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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P70207
Ligand clusters for P70207: Plexin-A2 from Mus musculus
Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3oktA
Structures
PDB
Schematic diagram
3okt
A
3al9
A
3oky
A
3al8
B
5l74
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3okt
(A),
3oky
(A).
2. Ligand:
NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
3al8
(B).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3okt
(A),
3oky
(A).
2. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
3al8
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 3
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3al8
(B),
3okt
(A),
3oky
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3okt
(A),
3oky
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3okt
(A),
5l74
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
5l74
(A).