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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P62166
Ligand clusters for P62166: Neuronal calcium sensor 1 from Homo sapiens
Top 6 (of 10) ligand clusters
Cluster 1.
5 ligand types
12 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2lcpA
Structures
PDB
Schematic diagram
2lcp
A
1g8i
A
6qi4
B
4guk
A
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
1PE × 5
Pentaethylene glycol
PDB codes:
1g8i
(A),
6qi4
(B),
2. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
4guk
(A),
3. Ligand:
P6G × 2
Hexaethylene glycol
PDB codes:
1g8i
(A),
6qi4
(B).
4. Ligand:
PG4 × 2
Tetraethylene glycol
PDB codes:
4guk
(A),
5. Ligand:
FKW × 1
2-(1~{h}-Indol-3-Yl)-~{N}-[(~{E})-(4-Nitro-3-Oxidanyl- Phenyl)methylideneamino]ethanamide
PDB code:
6qi4
(B).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
1PE × 1
Pentaethylene glycol
PDB code:
6qi4
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1g8i
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
DMS × 1
dimethyl sulfoxide
Dimethyl sulfoxide
PDB code:
6qi4
(B).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
6qi4
(B).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 1
PDB code:
1g8i
(A).