Ligand clusters for UniProt code P59071

Ligand clusters for P59071: Basic phospholipase A2 VRV-PL-VIIIa from Daboia russelii

		Top 6 (of 16) ligand clusters Cluster 1. 55 ligand types 113 ligands Cluster 2. 3 ligand types 26 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 2 ligand types 5 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 2 ligand types 3 ligands
Representative protein: 1fv0A

Structures

PDB		Schematic diagram
1fv0A
1sqzA
1sv9A
4fgaA
2fnxA
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Cluster 1 contains 55 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: IMN × 4 indomethacin Indomethacin PDB codes: 2oth(A), 3fo7(A), 3h1x(A), 4eix(A).
		2. Ligand: AJM × 3 ajmaline Ajmaline PDB codes: 1zr8(A), 2que(A), 3cbi(A).
		3. Ligand: NIM × 3 nimesulide 4-Nitro-2-Phenoxymethanesulfonanilide PDB codes: 1zwp(A), 2oth(A), 4eix(A).
		4. Ligand: DIF × 2 diclofenac 2-[2,6-Dichlorophenyl)amino]benzeneacetic acid PDB codes: 1sv9(A), 2b17(A).
		5. Ligand: OIN × 2 atropine (1r,5s)-8-Methyl-8-Azabicyclo[3.2.1]oct-3-Yl (2r)-3- Hydroxy-2-Phenylpropanoate PDB codes: 1th6(A), 2arm(A).
		6. Ligand: AIN × 1 acetylsalicylic acid 2-(Acetyloxy)benzoic acid PDB code: 1tgm(A).
		7. Ligand: BER × 1 berberine Berberine PDB code: 2qvd(A).
		8. Ligand: EUG × 1 isoeugenol 2-Methoxy-4-Vinyl-Phenol PDB code: 2qu9(A).
		9. Ligand: IBP × 1 dexibuprofen Ibuprofen PDB code: 2pws(A).
		10. Ligand: OPB × 1 oxyphenbutazone 4-Butyl-1-(4-Hydroxyphenyl)-2-Phenylpyrazolidine-3,5- Dione PDB code: 1q7a(A).
		11. Ligand: POL × 1 propyl alcohol N-Propanol PDB code: 2q1p(A).
		12. Ligand: TYL × 1 acetaminophen N-(4-Hydroxyphenyl)acetamide (tylenol) PDB code: 2dpz(A).
		13. Ligand: VIT × 1 vitamin e Vitamin e PDB code: 1kpm(A).
		14. Ligand: G3P × 1 Sn-Glycerol-3-Phosphate PDB code: 1y38(A).
		15. Ligand: ACT × 4 Acetate ion PDB codes: 1fv0(A), 2pb8(A), 2pyc(A),
		16. Ligand: TDA × 1 N-Tridecanoic acid PDB code: 1tp2(A).
		17. Ligand: MHN × 1 6-Methylheptan-1-Ol PDB code: 1oyf(A).
		18. Ligand: ANN × 2 4-Methoxybenzoic acid PDB codes: 1sv3(A), 2que(A).
		19. Ligand: COU × 1 Coumarin PDB code: 2pmj(A).
		20. Ligand: 2TN × 2 2-(4-(2-Hydroxy-3-(Isopropylamino)propoxy)phenyl) ethanamide PDB codes: 2otf(A), 2oub(A).
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Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: ACY × 2 acetic acid Acetic acid PDB codes: 1jq9(A), 1kpm(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 2pyc(A).
		3. Ligand: SO4 × 23 Sulfate ion PDB codes: 1fv0(A), 1skg(A), 1sqz(A), 1sv3(A), 1sxk(A), 1tdv(A), 1tg1(A), 1tg4(A), 1th6(A), 1tj9(A), 1tjk(A), 1tk4(A), 1zwp(A), 1zyx(A), 2arm(A), 2g58(A), 2oyf(A), 2q1p(A), 3fo7(A), 3g8f(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: BHA × 1 aminosalicylic acid 2-Hydroxy-4-Aminobenzoic acid PDB code: 1sxk(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: ACY × 4 acetic acid Acetic acid PDB codes: 1jq8(A), 1jq9(A), 1tg1(A), 1tj9(A).
		2. Ligand: GOL × 1 glycerin Glycerol PDB code: 1fv0(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: ACY × 1 acetic acid Acetic acid PDB code: 1jq9(A).
		2. Ligand: DIO × 1 1,4-Diethylene dioxide PDB code: 1fv0(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 1sxk(A), 2oyf(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 4qmc(A).