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Ligand clusters for UniProt code P53131
Ligand clusters for P53131: Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
4 ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Representative protein: 3kx2B
Structures
PDB
Schematic diagram
3kx2
B
5i8q
A
2xau
A
5jpt
A
Cluster 1 contains 4 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 4
PDB codes:
2xau
(A),
3kx2
(B),
5i8q
(A),
5jpt
(A).
2. Ligand:
ADP × 2
Adenosine-5'-Diphosphate
PDB codes:
2xau
(A),
3kx2
(B).
3. Ligand:
ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code:
5i8q
(A).
4. Ligand:
CDP × 1
Cytidine-5'-Diphosphate
PDB code:
5jpt
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
2xau
(A),
5jpt
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 2
Acetate ion
PDB codes:
2xau
(A),
5jpt
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Ni
1. Metal:
_NI × 2
PDB codes:
2xau
(A),
5jpt
(A).