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Ligand clusters for UniProt code P53131

Ligand clusters for P53131: Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

4 ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Representative protein: 3kx2B  
JSmol
 

Structures

PDB   Schematic diagram
3kx2B    
5i8qA    
2xauA    
5jptA    

 

 Cluster 1 contains 4 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 4
PDB codes: 2xau(A), 3kx2(B), 5i8q(A), 5jpt(A).


 
2. Ligand: ADP × 2
Adenosine-5'-Diphosphate
PDB codes: 2xau(A), 3kx2(B).


 
3. Ligand: ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code: 5i8q(A).


 
4. Ligand: CDP × 1
Cytidine-5'-Diphosphate
PDB code: 5jpt(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 2xau(A), 5jpt(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 2
Acetate ion
PDB codes: 2xau(A), 5jpt(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Ni
 
1. Metal: _NI × 2
PDB codes: 2xau(A), 5jpt(A).

 

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