Ligand clusters for UniProt code P50750

Ligand clusters for P50750: Cyclin-dependent kinase 9 OS=Homo sapiens GN=CDK9 PE=1 SV=3

		Top 6 (of 7) ligand clusters Cluster 1. 18 ligand types 19 ligands Cluster 2. 2 ligand types 5 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 3miaA

Structures

PDB		Schematic diagram
3miaA
4imyA
4or5A
3tnhA
4bcfA
		more ...

Cluster 1 contains 18 ligand types

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Ligand		Description
		1. Ligand: ADN × 1 adenosine Adenosine PDB code: 4ogr(A).
_Mg		2. Metal: _MG × 1 PDB code: 3mia(A).
		3. Ligand: F18 × 2 4-[(E)-(3,5-Diamino-1h-Pyrazol-4-Yl)diazenyl]phenol PDB codes: 3tn8(A), 3tnh(A).
		4. Ligand: AMP × 1 Adenosine monophosphate PDB code: 4imy(A).
		5. Ligand: ANP × 1 Phosphoaminophosphonic acid-Adenylate ester PDB code: 3mia(A).
		6. Ligand: ATP × 1 Adenosine-5'-Triphosphate PDB code: 3blq(A).
		7. Ligand: CPB × 1 2-(2-Chloro-Phenyl)-5,7-Dihydroxy-8-(3-Hydroxy-1- Methyl-Piperidin-4-Yl)-4h-Benzopyran-4-One PDB code: 3blr(A).
		8. Ligand: LCI × 1 [4-[[4-[5-(Cyclopropylmethyl)-1-Methyl-Pyrazol-4-Yl]-5- Fluoranyl-Pyrimidin-2- Yl]amino]cyclohexyl]azanium PDB code: 6gzh(A).
		9. Ligand: Q6E × 1 (1~{s},3~{r})-3-Acetamido-~{N}-[5-Chloranyl-4-(5,5- Dimethyl-4,6-Dihydropyrrolo[1,2-B]pyrazol-3- Yl) pyridin-2-Yl]cyclohexane-1-Carboxamide PDB code: 6z45(A).
		10. Ligand: RFZ × 1 5,6-Dichloro-1-Beta-D-Ribofuranosyl-1h-Benzimidazole PDB code: 3my1(A).
		11. Ligand: SLQ × 1 (2s)-2-({9-(1-Methylethyl)-6-[(4-Pyridin-2-Ylbenzyl) amino]-9h-Purin-2-Yl}amino)butan-1-Ol PDB code: 3lq5(A).
		12. Ligand: SO4 × 1 Sulfate ion PDB code: 4or5(A).
		13. Ligand: T3C × 1 2-[[3-(1,4-Diazepan-1-Yl)phenyl]amino]-4-[4-Methyl-2- (Methylamino)-1,3-Thiazol-5-Yl]pyrimidine-5- Carbonitrile PDB code: 4bcg(A).
		14. Ligand: T3E × 1 3-[[5-Cyano-4-[4-Methyl-2-(Methylamino)-1,3-Thiazol-5- Yl]pyrimidin-2-Yl]amino]benzenesulfonamide PDB code: 4bci(A).
		15. Ligand: T6Q × 1 2-[[3-(4-Ethanoyl-1,4-Diazepan-1-Yl)phenyl]amino]-4-[4- Methyl-2-(Methylamino)-1,3-Thiazol-5- Yl]pyrimidine-5- Carbonitrile PDB code: 4bcf(A).
		16. Ligand: T7Z × 1 4-(4-Methyl-2-Methylimino-3h-1,3-Thiazol-5-Yl)-2-[(4- Methyl-3-Morpholin-4-Ylsulfonyl- Phenyl) amino]pyrimidine-5-Carbonitrile PDB code: 4bch(A).
		17. Ligand: T9N × 1 2-[(3-Hydroxyphenyl)amino]-4-[4-Methyl-2-(Methylamino)- 1,3-Thiazol-5-Yl]pyrimidine-5-Carbonitrile PDB code: 4bcj(A).
Yt3		18. Metal: YT3 × 1 PDB code: 4or5(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 4 glycerin Glycerol PDB codes: 3my1(A), 3tn8(A), 4bcg(A), 4bch(A).
		2. Ligand: PO4 × 1 Phosphate ion PDB code: 3my1(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3my1(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 3blr(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 3tn8(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
Yt3		1. Metal: YT3 × 1 PDB code: 4or5(A).