Ligand clusters for UniProt code P41052

Ligand clusters for P41052: Membrane-bound lytic murein transglycosylase B from Escherichia coli (strain K12)

		2 ligand clusters Cluster 1. 8 ligand types 17 ligands Cluster 2. 2 ligand types 5 ligands
Representative protein: 1d0kA

Structures

PDB		Schematic diagram
1d0kA
1d0lA
1d0mA
1ltmA
1qdrA
		more ...

Cluster 1 contains 8 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 1d0k(A), 1qdt(A).
		2. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 1qut(A).
		3. Ligand: EDO × 4 1,2-Ethanediol PDB codes: 1ltm(A), 1qdr(A), 1qdt(A), 1qus(A).
		4. Ligand: BCN × 3 Bicine PDB codes: 1ltm(A), 1qdr(A), 1qus(A).
		5. Ligand: ALA-DGL × 2 DGL=D-Glutamic acid. PDB codes: 1d0k(A),
		6. Ligand: AMU-NAG × 2 AMU=N-Acetyl-Beta-Muramic acid, NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 1d0k(A),
		7. Ligand: BLG × 2 4-O-(4-O-Sulfonyl-N-Acetylglucosamininyl)-5- Methylhydroxy-L-Proline-Taurine PDB codes: 1d0l(A), 1d0m(A).
		8. Ligand: NDG-NAG × 1 NDG=2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose, NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 1d0m(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
_Na		1. Metal: _NA × 3 PDB codes: 1ltm(A), 1qdr(A), 1qus(A).
_Ca		2. Metal: _CA × 2 PDB codes: 1d0l(A), 1qdt(A).