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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P37840
Ligand clusters for P37840: Alpha-synuclein from Homo sapiens
Top 6 (of 22) ligand clusters
Cluster 1.
1 ligand type
5 ligands
Cluster 2.
2 ligand types
7 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3q26A
Structures
PDB
Schematic diagram
3q26
A
3q28
A
3q27
A
3q25
A
3q29
A
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
GLC-GLC × 5
GLC
=Alpha-D-Glucopyranose.
PDB codes:
3q25
(A),
3q26
(A),
3q27
(A),
3q28
(A),
3q29
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3q25
(A).
2. Ligand:
SO4 × 6
Sulfate ion
PDB codes:
3q25
(A),
3q26
(A),
3q27
(A),
3q28
(A),
3q29
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3q26
(A).
2. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
3q25
(A),
3q28
(A),
3q29
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3q26
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
3q25
(A),
3q27
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3q26
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3q25
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3q25
(A),
3q27
(A).