Ligand clusters for UniProt code P35439

Ligand clusters for P35439: Glutamate receptor ionotropic, NMDA 1 from Rattus norvegicus

		Top 6 (of 13) ligand clusters Cluster 1. 2 ligand types 7 ligands Cluster 2. 2 ligand types 13 ligands Cluster 3. 2 ligand types 14 ligands Cluster 4. 2 ligand types 15 ligands Cluster 5. 2 ligand types 7 ligands Cluster 6. 2 ligand types 6 ligands
Representative protein: 6wi1A

Structures

PDB		Schematic diagram
6wi1A
6whvA
6cnaA
6whxA
6whsA
		more ...

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 5 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3q41(A), 6mmn(A), 6mmp(A), 6mmr(A), 6mmw(A).
		2. Ligand: NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6mmg(A), 6mms(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 11 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3q41(A), 6mmn(A), 6mmp(A), 6mmr(A), 6mms(A), 6mmw(A), 6whr(A), 6whs(A), 6wht(A), 6whu(A), 6wi1(A).
		2. Ligand: NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6cna(A), 6mmg(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 12 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3q41(A), 6cna(A), 6mmp(A), 6mmr(A), 6mms(A), 6mmw(A), 6whr(A), 6whs(A), 6whu(A), 6whv(A), 6wi1(A).
		2. Ligand: NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6mmg(A), 6mmn(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 10 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3q41(A), 6mmg(A), 6mmn(A), 6mmp(A), 6mmr(A), 6mms(A), 6mmw(A),
		2. Ligand: NAG-NAG × 5 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6cna(A), 6mmn(A), 6mmp(A), 6mms(A), 6wht(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 5 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6cna(A), 6mmp(A), 6mmr(A), 6mms(A), 6mmw(A).
		2. Ligand: NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6mmg(A), 6mmn(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6mmp(A), 6mmr(A), 6mms(A).
		2. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6mmg(A), 6mmn(A), 6mmw(A).