Ligand clusters for UniProt code P35247

Ligand clusters for P35247: Pulmonary surfactant-associated protein D from Homo sapiens

		3 ligand clusters Cluster 1. 17 ligand types 26 ligands Cluster 2. 1 ligand type 14 ligands Cluster 3. 1 ligand type 2 ligands
Representative protein: 2ricA

Structures

PDB		Schematic diagram
2ricA
3g84A
2gguA
3ikqA
5oxsA
		more ...

Cluster 1 contains 17 ligand types

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Ligand		Description
		1. Ligand: GAL × 1 galactose Beta-D-Galactopyranose PDB code: 3ikn(A).
		2. Ligand: INS × 1 inositol 1,2,3,4,5,6-Hexahydroxy-Cyclohexane PDB code: 2os9(A).
_Ca		3. Metal: _CA × 7 PDB codes: 1pw9(A), 2ggx(A), 2ork(A), 2os9(A), 3dbz(A), 3ikp(A), 4m17(A).
		4. Ligand: GMH × 2 L-Glycero-Alpha-D-Manno-Heptopyranose PDB codes: 2rib(A), 2ric(A).
		5. Ligand: MAN × 2 Alpha-D-Mannopyranose PDB codes: 3ikq(A), 3ikr(A).
		6. Ligand: MAN-MAN × 2 MAN=Alpha-D-Mannopyranose. PDB codes: 3g83(A), 3g84(A).
		7. Ligand: 289 × 1 D-Glycero-Alpha-D-Manno-Heptopyranose PDB code: 2ria(A).
		8. Ligand: 291 × 1 Prop-2-En-1-Yl 7-O-Carbamoyl-L-Glycero-Alpha-D-Manno- Heptopyranoside PDB code: 2rid(A).
		9. Ligand: 293 × 1 2-Deoxy-Beta-L-Galacto-Heptopyranose PDB code: 2rie(A).
		10. Ligand: BM3 × 1 2-Acetamido-2-Deoxy-Alpha-D-Mannopyranose PDB code: 2orj(A).
		11. Ligand: GLC-GLC × 1 GLC=Alpha-D-Glucopyranose. PDB code: 1pwb(A).
		12. Ligand: GLC-GLC-GLC × 1 GLC=Alpha-D-Glucopyranose. PDB code: 2ggu(A).
		13. Ligand: K5B-GMH-GMH-GLC × 1 K5B=4,7-Anhydro-3-Deoxy-D-Gluco-Oct-2-Ulosonic acid, GMH=L-Glycero-Alpha-D-Manno-Heptopyranose, GLC=Alpha-D-Glucopyranose. PDB code: 5oxs(A).
		14. Ligand: MAN-MAN-MAN × 1 MAN=Alpha-D-Mannopyranose. PDB code: 4m18(A).
		15. Ligand: MMA × 1 Methyl alpha-D-Mannopyranoside PDB code: 3g81(A).
		16. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 3dbz(A).
		17. Ligand: NPJ × 1 4-Nitrophenyl 4-O-Alpha-D-Glucopyranosyl-Alpha-D- Galactopyranoside PDB code: 2ggx(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 14 PDB codes: 1pw9(A), 2ggx(A), 2ork(A), 2os9(A), 3dbz(A), 3ikp(A), 4m17(A),

Cluster 3 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 2 PDB codes: 1pw9(A), 3ikp(A).