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Ligand clusters for UniProt code P28327

Ligand clusters for P28327: Rhodopsin kinase GRK1 from Bos taurus

Top 6 (of 11) ligand clusters
Cluster 1.
6 ligand types
27 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
4 ligands
Cluster 6.
1 ligand type
6 ligands
Representative protein: 3c4wB  
JSmol
 

Structures

PDB   Schematic diagram
3c4wB    
4l9iA    
3t8oA    
4wboA    
4pniA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 15
PDB codes: 3c4w(A), 3c4x(A), 3c4z(A), 3c50(A), 3c51(A), 3qc9(A), 3t8o(A).


 
2. Ligand: 8PR × 1
paroxetine
Paroxetine
PDB code: 4l9i(A).


 
3. Ligand: ANW × 1
amlexanox
2-Amino-7-(1-Methylethyl)-5-Oxo-5h-Chromeno[2,3- B]pyridine-3-Carboxylic acid
PDB code: 4wbo(A).


 
4. Ligand: ADP × 5
Adenosine-5'-Diphosphate
PDB codes: 3c4z(A), 3c50(A), 3c51(A), 3qc9(A).


 
5. Ligand: ATP × 4
Adenosine-5'-Triphosphate
PDB codes: 3c4w(A), 3c4x(A), 3t8o(A).


 
6. Ligand: KQQ × 1
3-[(2-{[1-(N,N-Dimethylglycyl)-6-Methoxy-4,4-Dimethyl- 1,2,3,4-Tetrahydroquinolin-7-Yl]amino}-7h-
Pyrrolo[2,3- D]pyrimidin-4-Yl)amino]thiophene-2-Carboxamide
PDB code: 4pni(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MES × 2
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes: 3c50(A), 4l9i(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3qc9(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3t8o(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description

_Cl
 
1. Metal: _CL × 3
PDB codes: 3c4z(A), 3c50(A), 4pni(A).

_Br
 
2. Metal: _BR × 1
PDB code: 3c51(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 6
PDB codes: 3c4w(A), 3c4z(A), 3c50(A), 4l9i(A), 4pni(A), 4wbo(A).

 

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