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Ligand clusters for UniProt code P26196

Ligand clusters for P26196: Probable ATP-dependent RNA helicase DDX6 from Homo sapiens

Top 6 (of 16) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 4ct4B  
JSmol
 

Structures

PDB   Schematic diagram
4ct4B    
1vecA    
2wayA    
6s8sA    
2waxA    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2way(A).


 
2. Ligand: CXS × 3
3-Cyclohexyl-1-Propylsulfonic acid
PDB codes: 2wax(A), 6s8s(A).


 
3. Ligand: PO4 × 1
Phosphate ion
PDB code: 6s8s(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4crw(B).


 
2. Ligand: CXS × 1
3-Cyclohexyl-1-Propylsulfonic acid
PDB code: 2wax(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: CXS × 2
3-Cyclohexyl-1-Propylsulfonic acid
PDB codes: 2wax(A), 6s8s(A).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 2wax(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: CXS × 1
3-Cyclohexyl-1-Propylsulfonic acid
PDB code: 6s8s(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: PO4 × 2
Phosphate ion
PDB codes: 2wax(A), 6s8s(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 6f9s(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 6s8s(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 6f9s(A).

 

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