Ligand clusters for UniProt code P21707

Ligand clusters for P21707: Synaptotagmin-1 from Rattus norvegicus

		Top 6 (of 20) ligand clusters Cluster 1. 3 ligand types 6 ligands Cluster 2. 4 ligand types 22 ligands Cluster 3. 2 ligand types 3 ligands Cluster 4. 1 ligand type 4 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 5cchE

Structures

PDB		Schematic diagram
5cchE
6mti2
5ccgE
5kj7E
5kj8E
		more ...

Cluster 1 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 5ccj(A),
		2. Ligand: ACT × 2 Acetate ion PDB codes: 1tjx(A), 1uow(A).
		3. Ligand: SO4 × 2 Sulfate ion PDB codes: 5ccj(A),

Cluster 2 contains 4 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 2 PDB codes: 5cci(E), 6mti(2).
_Ca		2. Metal: _CA × 18 PDB codes: 1tjx(A), 1uov(A), 1uow(A), 2yoa(A), 5ccg(E), 5cch(E), 5kj7(E), 5kj8(E),
		3. Ligand: SEP × 1 Phosphoserine PDB code: 2yoa(A).
_Sr		4. Metal: _SR × 1 PDB code: 1tjm(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 1uov(A), 5ccj(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 5ccj(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 4 glycerin Glycerol PDB codes: 1tjm(A), 1tjx(A), 1uow(A), 5ccj(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5ccj(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5ccj(A).