Ligand clusters for UniProt code P20449

Ligand clusters for P20449: ATP-dependent RNA helicase DBP5 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

		Top 6 (of 13) ligand clusters Cluster 1. 3 ligand types 8 ligands Cluster 2. 1 ligand type 5 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 2 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 2 ligands
Representative protein: 3pewA

Structures

PDB		Schematic diagram
3pewA
3rrnA
3rrmA
5elxA
3peyA
		more ...

Cluster 1 contains 3 ligand types

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Ligand		Description
		1. Ligand: ADP × 4 Adenosine-5'-Diphosphate PDB codes: 3pew(A), 3pey(A), 3rrm(A), 3rrn(A).
		2. Ligand: BEF × 3 Beryllium trifluoride ion PDB codes: 3pew(A), 3pey(A), 5elx(A).
		3. Ligand: M2A × 1 [(2~{r},3~{r},4~{r},5~{s})-2-(6-Aminopurin-9-Yl)-4- Oxidanyl-5- [[Oxidanyl(phosphonooxy) phosphoryl]oxymethyl]oxolan-3-Yl] 2-(Methylamino) benzoate PDB code: 5elx(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: IHP × 5 Inositol hexakisphosphate PDB codes: 3peu(A), 3pev(A), 3rrm(A), 3rrn(A),

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: IHP × 1 Inositol hexakisphosphate PDB code: 3rrn(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 3peu(A), 3pev(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3pey(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 3peu(A), 3pev(A).