Ligand clusters for UniProt code P19492

Ligand clusters for P19492: Glutamate receptor 3 from Rattus norvegicus

		Top 6 (of 18) ligand clusters Cluster 1. 8 ligand types 19 ligands Cluster 2. 3 ligand types 6 ligands Cluster 3. 2 ligand types 6 ligands Cluster 4. 2 ligand types 5 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 2 ligand types 2 ligands
Representative protein: 6njmA

Structures

PDB		Schematic diagram
6njmA
6njnC
5fwyB
3o21A
6fpjA
		more ...

Cluster 1 contains 8 ligand types

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Ligand		Description
		1. Ligand: GLU × 6 PDB codes: 3dln(A), 3lsw(A), 3lsx(A), 3m3f(A), 3m3k(A), 4f3b(A).
		2. Ligand: KAI × 4 3-(Carboxymethyl)-4-Isopropenylproline PDB codes: 4f22(A), 4f31(B), 4f39(A), 4f3g(A).
		3. Ligand: QUS × 3 (S)-2-Amino-3-(3,5-Dioxo-[1,2,4]oxadiazolidin-2-Yl)- Propionic acid PDB codes: 4f29(A), 4f2o(A), 4f2q(A).
		4. Ligand: ZK1 × 2 {[7-Morpholin-4-Yl-2,3-Dioxo-6-(Trifluoromethyl)-3,4- Dihydroquinoxalin-1(2h)- Yl]methyl}phosphonic acid PDB codes: 6njm(A), 6njn(C).
		5. Ligand: AMQ × 1 (S)-Alpha-Amino-3-Hydroxy-5-Methyl-4-Isoxazolepropionic acid PDB code: 3dp4(A).
		6. Ligand: CNI × 1 7-Nitro-2,3-Dioxo-2,3-Dihydroquinoxaline-6-Carbonitrile PDB code: 4f1y(A).
		7. Ligand: CWD × 1 3-(5-Chloro-2,4-Dioxo-3,4-Dihydropyrimidin-1(2h)-Yl)-L- Alanine PDB code: 3rt8(A).
		8. Ligand: FWD × 1 2-Amino-3-(5-Fluoro-2,4-Dioxo-3,4-Dihydro-2h-Pyrimidin- 1-Yl)-Propionic acid PDB code: 3rt6(B).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 4 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3o21(A), 5fwy(B), 6flr(A), 6fpj(A).
		2. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 6njm(A).
		3. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 6njn(C).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 5 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3o21(A), 5fwy(B), 6flr(A), 6fpj(A), 6njm(A).
		2. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 6njn(C).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 5fwy(B), 6flr(A), 6fpj(A).
		2. Ligand: NAG-NAG-BMA × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB codes: 6njm(A), 6njn(C).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: 4MP × 1 1-(4-Methoxybenzoyl)-2-Pyrrolidinone PDB code: 3lsw(A).
		2. Ligand: P99 × 1 2-[2,6-Difluoro-4-({2-[(Phenylsulfonyl) amino]ethyl}sulfanyl)phenoxy]acetamide PDB code: 3m3f(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 6fpj(A).
		2. Ligand: PO4 × 1 Phosphate ion PDB code: 6fpj(A).