Ligand clusters for UniProt code P18965

Ligand clusters for P18965: Factor V activator RVV-V gamma from Daboia siamensis

		Top 6 (of 7) ligand clusters Cluster 1. 2 ligand types 2 ligands Cluster 2. 2 ligand types 4 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 2 ligand types 2 ligands Cluster 6. 2 ligand types 2 ligands
Representative protein: 3s9aA

Structures

PDB		Schematic diagram
3s9aA
3sbkA
3s9bA
3s9cA

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: 0G6 × 1 D-Phenylalanyl-N-[(2s,3s)-6-{[Amino(iminio) methyl]amino}-1-Chloro-2-Hydroxyhexan-3-Yl]-L- Prolinamide PDB code: 3sbk(A).
		2. Ligand: ILE-ALA-ALA-TRP-TYR-LEU-ARG × 1 PDB code: 3s9c(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3s9a(A), 3s9b(A), 3sbk(A).
		2. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 3s9c(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: BGC × 1 Beta-D-Glucopyranose PDB code: 3s9c(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GLC × 1 d-glucose Alpha-D-Glucopyranose PDB code: 3s9c(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 1 PDB code: 3s9c(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 3s9c(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 1 PDB code: 3s9c(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 3s9c(A).