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Ligand clusters for UniProt code P15424
Ligand clusters for P15424: ATP-dependent RNA helicase MSS116, mitochondrial from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
2 ligand clusters
Cluster 1.
9 ligand types
18 ligands
Cluster 2.
1 ligand type
1 ligand
Representative protein: 3i5xA
Structures
PDB
Schematic diagram
3i5x
A
4tyn
A
3sqx
A
4tz6
A
3i5y
A
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Cluster 1 contains 9 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
4tyn
(A),
4tz6
(A).
2. Ligand:
BEF × 5
Beryllium trifluoride ion
PDB codes:
4tyn
(A),
4tyw
(A),
4tyy
(A),
4tz0
(A),
4tz6
(A).
3. Ligand:
ANP × 4
Phosphoaminophosphonic acid-Adenylate ester
PDB codes:
3i5x
(A),
3i5y
(A),
3sqw
(A),
3sqx
(A).
4. Ligand:
ADP × 2
Adenosine-5'-Diphosphate
PDB codes:
4tyn
(A),
4tyw
(A).
5. Ligand:
ADP-ALF × 1
ADP
=Adenosine-5'-Diphosphate,
ALF
=Tetrafluoroaluminate ion.
PDB code:
3i62
(A).
6. Ligand:
ADP-BEF × 1
ADP
=Adenosine-5'-Diphosphate,
BEF
=Beryllium trifluoride ion.
PDB code:
3i61
(A).
7. Ligand:
CDP × 1
Cytidine-5'-Diphosphate
PDB code:
4tyy
(A).
8. Ligand:
GDP × 1
Guanosine-5'-Diphosphate
PDB code:
4tz0
(A).
9. Ligand:
UDP × 1
Uridine-5'-Diphosphate
PDB code:
4tz6
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
4tyw
(A).