Ligand clusters for UniProt code P14769

Ligand clusters for P14769: N-acetyllactosaminide alpha-1,3-galactosyltransferase from Bos taurus

		Top 6 (of 11) ligand clusters Cluster 1. 15 ligand types 61 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 8 ligands Cluster 6. 1 ligand type 5 ligands
Representative protein: 2vs4A

Structures

PDB		Schematic diagram
2vs4A
1gx4A
1vzuA
1o7qA
2jcoA
		more ...

Cluster 1 contains 15 ligand types

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Ligand		Description
		1. Ligand: UDP × 12 Uridine-5'-Diphosphate PDB codes: 1gwv(A), 1gww(A), 1gx0(A), 1gx4(A), 1k4v(A), 1o7o(A), 1o7q(A), 1vzt(A), 1vzu(A), 1vzx(A), 2jcj(A), 2jck(A).
		2. Ligand: UPG × 1 Uridine-5'-Diphosphate-Glucose PDB code: 1g93(A).
_Mn		3. Metal: _MN × 22 PDB codes: 1g8o(A), 1g93(A), 1gwv(A), 1gww(A), 1gx0(A), 1gx4(A), 1k4v(A), 1o7o(A), 1o7q(A), 1vzt(A), 1vzu(A), 1vzx(A), 2jcj(A), 2jck(A), 2vfz(A), 2vs3(A), 2vs4(A), 2vs5(A), 2vxl(A), 2wgz(A).
		4. Ligand: TRS × 2 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB codes: 1vzt(A), 2jcj(A).
		5. Ligand: GAL × 1 galactose Beta-D-Galactopyranose PDB code: 1g93(A).
		6. Ligand: GOL × 1 glycerin Glycerol PDB code: 5nr9(A).
		7. Ligand: UPF × 1 Uridine-5'-Diphosphate-2-Deoxy-2- Fluorogalactose PDB code: 2vfz(A).
		8. Ligand: U5P × 1 Uridine-5'-Monophosphate PDB code: 1g8o(A).
		9. Ligand: UDP × 4 Uridine-5'-Diphosphate PDB codes: 2vs3(A), 2vs4(A), 2vxl(A), 2wgz(A).
		10. Ligand: BGC-GAL × 6 BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB codes: 1gwv(A), 1o7o(A), 1vzu(A), 5nrb(A), 5nrd(A), 5nre(A).
		11. Ligand: GDU × 3 Galactose-Uridine-5'-Diphosphate PDB codes: 2vs5(A), 5nrb(A), 5nrd(A).
		12. Ligand: NAG-GAL × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB codes: 1gx4(A), 1o7q(A), 1vzx(A).
		13. Ligand: NDG-GAL × 2 NDG=2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB codes: 2vs3(A), 2vs4(A).
		14. Ligand: 147 × 1 4-Nitrophenyl beta-D-Galactopyranoside PDB code: 2wgz(A).
_Co		15. Metal: _CO × 1 PDB code: 5nrd(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: UDP × 1 Uridine-5'-Diphosphate PDB code: 1o7q(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 2jcj(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 2vxm(B).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 8 glycerin Glycerol PDB codes: 1gx0(A), 1gx4(A), 1k4v(A), 1o7q(A), 1vzu(A), 1vzx(A), 2wgz(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 5 glycerin Glycerol PDB codes: 1gx4(A), 2jco(A), 2vs4(A), 2wgz(A), 5nrd(A).