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Ligand clusters for UniProt code P12643

Ligand clusters for P12643: Bone morphogenetic protein 2 from Homo sapiens

Top 6 (of 11) ligand clusters
Cluster 1.
4 ligand types
5 ligands
Cluster 2.
4 ligand types
5 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3bmpA  
JSmol
 

Structures

PDB   Schematic diagram
3bmpA    
1reuA    
4ui2B    
4ui1A    
4uhzA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 4uhz(A),


 
2. Ligand: FLC × 1
Citrate anion
PDB code: 4ui0(A).


 
3. Ligand: NAG-NAG-BMA-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 6omn(E).


 
4. Ligand: SRT × 1
S,R meso-Tartaric acid
PDB code: 4ui2(B).

 

 Cluster 2 contains 4 ligand types

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 4uhz(A),


 
2. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 3bmp(A).


 
3. Ligand: SRT × 1
S,R meso-Tartaric acid
PDB code: 4ui2(B).

_Cl
 
4. Metal: _CL × 1
PDB code: 4ui1(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 1reu(A), 4ui0(A).


 
2. Ligand: ACT × 1
Acetate ion
PDB code: 4ui2(B).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 1reu(A).


 
2. Ligand: NO3 × 1
Nitrate ion
PDB code: 4ui1(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SRT × 1
S,R meso-Tartaric acid
PDB code: 4ui2(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4uhz(A).

 

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