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PDBsum
Ligand clusters for UniProt code P12314
Ligand clusters for P12314: High affinity immunoglobulin gamma Fc receptor I from Homo sapiens
Top 6 (of 10) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
3 ligand types
4 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4w4oC
Structures
PDB
Schematic diagram
4w4o
C
3rjd
A
4x4m
E
4zne
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-FUC × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose,
GAL
=Beta-D-Galactopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB code:
4w4o
(C).
2. Ligand:
NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUL × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose,
FUL
=Beta-L-Fucopyranose.
PDB code:
4x4m
(E).
3. Ligand:
NAG-NAG-MAN-MAN-NAG-MAN-NAG-FUL × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose,
FUL
=Beta-L-Fucopyranose.
PDB code:
4zne
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG-MAN × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
3rjd
(A),
4zne
(A).
2. Ligand:
NAG-NAG-BMA-MAN-MAN-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
4w4o
(C).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
4zne
(A).
2. Ligand:
NAG-NAG-MAN × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
3rjd
(A),
4zne
(A).
3. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
4w4o
(C).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
4zne
(A).
2. Ligand:
NAG-NAG-MAN-FUC × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB code:
3rjd
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG-NAG × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes:
3rjd
(A),
4zne
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
P33 × 1
3,6,9,12,15,18-Hexaoxaicosane-1,20-Diol
PDB code:
3rjd
(A).