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Ligand clusters for UniProt code P12314

Ligand clusters for P12314: High affinity immunoglobulin gamma Fc receptor I from Homo sapiens

Top 6 (of 10) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
3 ligand types
4 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4w4oC  
JSmol
 

Structures

PDB   Schematic diagram
4w4oC    
3rjdA    
4x4mE    
4zneA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, GAL=Beta-D-Galactopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 4w4o(C).


 
2. Ligand: NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUL × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, FUL=Beta-L-Fucopyranose.
PDB code: 4x4m(E).


 
3. Ligand: NAG-NAG-MAN-MAN-NAG-MAN-NAG-FUL × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose, FUL=Beta-L-Fucopyranose.
PDB code: 4zne(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG-MAN × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose.
PDB codes: 3rjd(A), 4zne(A).


 
2. Ligand: NAG-NAG-BMA-MAN-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 4w4o(C).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 4zne(A).


 
2. Ligand: NAG-NAG-MAN × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose.
PDB codes: 3rjd(A), 4zne(A).


 
3. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 4w4o(C).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 4zne(A).


 
2. Ligand: NAG-NAG-MAN-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 3rjd(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG-NAG × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 3rjd(A), 4zne(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: P33 × 1
3,6,9,12,15,18-Hexaoxaicosane-1,20-Diol
PDB code: 3rjd(A).

 

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