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Ligand clusters for UniProt code P0CK31

Ligand clusters for P0CK31: RNA-directed RNA polymerase lambda-3 OS=Reovirus type 3 (strain Dearing) GN=L1 PE=1 SV=1

3 ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
5 ligand types
11 ligands
Cluster 3.
1 ligand type
1 ligand
Representative protein: 1n1hA  
JSmol
 

Structures

PDB   Schematic diagram
1n1hA    
1n38A    
1n35A    
1mwhA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: CH1 × 4
3'-Deoxy-Cytidine-5'-Triphosphate
PDB codes: 1n35(A), 1n38(A),


 
2. Ligand: G7M-GDP × 1
G7M=N7-Methyl-Guanosine-5'-Monophosphate, GDP=Guanosine-5'-Diphosphate.
PDB code: 1n1h(A).


 
3. Ligand: GTG × 1
7-Methyl-Guanosine-5'-Triphosphate-5'-Guanosine
PDB code: 1mwh(A).

 

 Cluster 2 contains 5 ligand types

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Ligand Description

_Mn
 
1. Metal: _MN × 6
PDB codes: 1n1h(A), 1n35(A), 1n38(A),


 
2. Ligand: CH1 × 2
3'-Deoxy-Cytidine-5'-Triphosphate
PDB codes: 1n1h(A), 1n35(A).


 
3. Ligand: GH3 × 1
3'-Deoxy-Guanosine-5'-Triphosphate
PDB code: 1n1h(A).


 
4. Ligand: U3H × 1
3'-Deoxy-Uridine 5'-Triphosphate
PDB code: 1n38(A).


 
5. Ligand: __G-__C × 1
PDB code: 1n38(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Mn
 
1. Metal: _MN × 1
PDB code: 1mwh(A).

 

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