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EBI
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Ligand clusters for UniProt code P0AEE3
Ligand clusters for P0AEE3: Serine endoprotease DegS OS=Escherichia coli (strain K12) OX=83333 GN=degS PE=1 SV=1
Top 6 (of 10) ligand clusters
Cluster 1.
6 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6ew9A
Structures
PDB
Schematic diagram
6ew9
A
4rr1
A
4rqy
A
3gdu
A
3gcn
A
more ...
Cluster 1 contains 6 ligand types
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Ligand
Description
1. Ligand:
TYR-GLN-PHE × 3
PDB codes:
3gcn
(A),
3gdv
(A),
4rqz
(A).
2. Ligand:
VAL-TYR-GLN-PHE × 3
PDB codes:
1soz
(A),
3gco
(A),
4rqz
(B).
3. Ligand:
TYR-ARG-PHE × 2
PDB codes:
3gdu
(A),
4. Ligand:
LEU-VAL-TYR-GLN-PHE × 1
PDB code:
6ew9
(A).
5. Ligand:
VAL-TYR-TRP-PHE × 1
PDB code:
2r3y
(A).
6. Ligand:
VAL-TYR-TYR-PHE × 1
PDB code:
3gds
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
6ew9
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
2qf3
(A),
_Ca
2. Metal:
_CA × 1
PDB code:
6ew9
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3lgi
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3lgi
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
4rqy
(A).