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Ligand clusters for UniProt code P0ACB2

Ligand clusters for P0ACB2: Delta-aminolevulinic acid dehydratase OS=Escherichia coli (strain K12) OX=83333 GN=hemB PE=1 SV=2

Top 6 (of 13) ligand clusters
Cluster 1.
5 ligand types
12 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1b4eA  
JSmol
 

Structures

PDB   Schematic diagram
1b4eA    
5mhbA    
5ic2A    
1i8jA    
1l6sA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: 4OX × 1
4-Oxodecanedioic acid
PDB code: 1l6y(A).


 
2. Ligand: DSB × 2
4,7-Dioxosebacic acid
PDB codes: 1i8j(A), 1l6s(A).

_Zn
 
3. Metal: _ZN × 6
PDB codes: 1b4e(A), 1i8j(A), 1l6s(A), 1l6y(A), 5ic2(A), 5mhb(A).


 
4. Ligand: PBG × 2
3-[5-(Aminomethyl)-4-(Carboxymethyl)-1h-Pyrrol-3- Yl]propanoic acid
PDB codes: 5ic2(A), 5mhb(A).


 
5. Ligand: SHF × 1
Laevulinic acid
PDB code: 1b4e(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1l6y(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 1b4e(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1b4e(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 1b4e(A), 5ic2(A), 5mhb(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1b4e(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1l6y(A).

 

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