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EBI
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Ligand clusters for UniProt code P0ACB2
Ligand clusters for P0ACB2: Delta-aminolevulinic acid dehydratase OS=Escherichia coli (strain K12) OX=83333 GN=hemB PE=1 SV=2
Top 6 (of 13) ligand clusters
Cluster 1.
5 ligand types
12 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1b4eA
Structures
PDB
Schematic diagram
1b4e
A
5mhb
A
5ic2
A
1i8j
A
1l6s
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
4OX × 1
4-Oxodecanedioic acid
PDB code:
1l6y
(A).
2. Ligand:
DSB × 2
4,7-Dioxosebacic acid
PDB codes:
1i8j
(A),
1l6s
(A).
_Zn
3. Metal:
_ZN × 6
PDB codes:
1b4e
(A),
1i8j
(A),
1l6s
(A),
1l6y
(A),
5ic2
(A),
5mhb
(A).
4. Ligand:
PBG × 2
3-[5-(Aminomethyl)-4-(Carboxymethyl)-1h-Pyrrol-3- Yl]propanoic acid
PDB codes:
5ic2
(A),
5mhb
(A).
5. Ligand:
SHF × 1
Laevulinic acid
PDB code:
1b4e
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1l6y
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1b4e
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1b4e
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1b4e
(A),
5ic2
(A),
5mhb
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1b4e
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1l6y
(A).