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Ligand clusters for UniProt code P0A6F3
Ligand clusters for P0A6F3: Glycerol kinase OS=Escherichia coli (strain K12) OX=83333 GN=glpK PE=1 SV=2
Top 6 (of 8) ligand clusters
Cluster 1.
9 ligand types
24 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1bo5O
Structures
PDB
Schematic diagram
1bo5
O
1glj
Y
1bwf
Y
1bu6
O
3ezw
A
more ...
Cluster 1 contains 9 ligand types
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Ligand
Description
1. Ligand:
ADP × 5
Adenosine-5'-Diphosphate
PDB codes:
1glb
(G),
1glc
(G),
1gld
(G),
1gle
(G),
1glf
(O).
2. Ligand:
GOL × 10
glycerin
Glycerol
PDB codes:
1bo5
(O),
1bot
(O),
1bu6
(O),
1bwf
(Y),
1gla
(G),
1glb
(G),
1glf
(O),
1glj
(Y),
1gll
(Y),
3ezw
(A).
_Mg
3. Metal:
_MG × 1
PDB code:
1glc
(G).
4. Ligand:
G3H × 3
Glyceraldehyde-3-Phosphate
PDB codes:
1glc
(G),
1gld
(G),
1gle
(G).
5. Ligand:
ACP × 1
Phosphomethylphosphonic acid adenylate ester
PDB code:
1gll
(Y).
6. Ligand:
ATS × 1
Gamma-Arsono-Beta, Gamma-Methyleneadenosine-5'- Diphosphate
PDB code:
1glj
(Y).
7. Ligand:
ATF × 1
Phosphodifluoromethylphosphonic acid-Adenylate ester
PDB code:
1bwf
(Y).
8. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1bu6
(O).
_Zn
9. Metal:
_ZN × 1
PDB code:
1gle
(G).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
FBP × 1
Beta-Fructose-1,6-Diphosphate
PDB code:
1bo5
(O).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
1glf
(O).
3. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1bu6
(O).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code:
1bot
(O).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3ezw
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3ezw
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 2
PDB codes:
1glc
(G),
1gle
(G).