Ligand clusters for UniProt code P08799

Ligand clusters for P08799: Myosin-2 heavy chain from Dictyostelium discoideum

		Top 6 (of 50) ligand clusters Cluster 1. 24 ligand types 91 ligands Cluster 2. 7 ligand types 18 ligands Cluster 3. 8 ligand types 14 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 3 ligand types 5 ligands
Representative protein: 1jwyA

Structures

PDB		Schematic diagram
1jwyA
2akaA
6z7tA
6z7uA
1jx2A
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Cluster 1 contains 24 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
_Mg		1. Metal: _MG × 37 PDB codes: 1d0x(A), 1d0y(A), 1d0z(A), 1d1a(A), 1d1b(A), 1d1c(A), 1fmw(A), 1g8x(A), 1lvk(A), 1mma(A), 1mmd(A), 1mmg(A), 1mmn(A), 1mnd(A), 1mne(A), 1vom(A), 1w9i(A), 1w9j(A), 1w9k(A), 1w9l(A), 1yv3(A), 2jhr(A), 2jj9(A), 2x9h(A), 2xel(A), 2xo8(A), 2y8i(X), 3bz7(A), 3bz8(A), 3bz9(A), 3mjx(A), 3mkd(A), 3mnq(A), 3myh(X), 3myk(X), 3myl(X), 4pjk(A).
		2. Ligand: GOL × 2 glycerin Glycerol PDB codes: 4pjk(A), 6z7t(A).
		3. Ligand: ADP × 11 Adenosine-5'-Diphosphate PDB codes: 1g8x(A), 1jwy(A), 1jx2(A), 1mma(A), 1yv3(A), 2y8i(X), 3bz7(A), 3bz8(A), 3bz9(A), 4pjk(A), 6z7u(A).
		4. Ligand: AD9 × 9 Adp metavanadate PDB codes: 2jhr(A), 2jj9(A), 2x9h(A), 2xel(A), 2xo8(A), 3mjx(A), 3mnq(A), 7b19(A), 7b1a(A).
		5. Ligand: VO4 × 4 Vanadate ion PDB codes: 1yv3(A), 3bz7(A), 3bz8(A), 3bz9(A).
		6. Ligand: ADP-BEF × 3 ADP=Adenosine-5'-Diphosphate, BEF=Beryllium trifluoride ion. PDB codes: 1mmd(A), 1w9i(A), 1w9k(A).
		7. Ligand: EDO × 3 1,2-Ethanediol PDB codes: 1w9i(A), 6z7t(A), 6z7u(A).
		8. Ligand: VO4-ADP × 3 VO4=Vanadate ion, ADP=Adenosine-5'-Diphosphate. PDB codes: 1vom(A), 3mkd(A), 3myh(X).
		9. Ligand: ADP-ALF × 2 ALF=Tetrafluoroaluminate ion, ADP=Adenosine-5'-Diphosphate. PDB codes: 1w9j(A), 1w9l(A).
		10. Ligand: ANP × 2 Phosphoaminophosphonic acid-Adenylate ester PDB codes: 1mmn(A), 3myk(X).
		11. Ligand: POP × 2 Pyrophosphate 2- PDB codes: 1mne(A), 3myl(X).
		12. Ligand: AGS × 1 Phosphothiophosphoric acid-Adenylate ester PDB code: 1mmg(A).
		13. Ligand: ALF-ADP × 1 ALF=Tetrafluoroaluminate ion, ADP=Adenosine-5'-Diphosphate. PDB code: 1mnd(A).
		14. Ligand: ATP × 1 Adenosine-5'-Triphosphate PDB code: 1fmw(A).
		15. Ligand: DAE × 1 O,P-Dinitrophenyl aminoethyldiphosphate-Beryllium trifluoride PDB code: 1d1a(A).
		16. Ligand: DAQ × 1 O,P-Dinitrophenyl aminopropyldiphosphate beryllium trifluoride PDB code: 1d1b(A).
		17. Ligand: MLI × 1 Malonate ion PDB code: 7b19(A).
		18. Ligand: MNQ × 1 M-Nitrophenyl aminoethyldiphosphate beryllium trifluoride PDB code: 1d0x(A).
		19. Ligand: MNT-BEF × 1 MNT=2'(3')-O-N-Methylanthraniloyl-Adenosine-5'-Diphosphate, BEF=Beryllium trifluoride ion. PDB code: 1lvk(A).
		20. Ligand: NMQ × 1 N-Methyl o-Nitrophenyl aminoethyldiphosphate beryllium trifluoride PDB code: 1d1c(A).
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Cluster 2 contains 7 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 7b19(A).
		2. Ligand: EDO × 8 1,2-Ethanediol PDB codes: 1w9i(A), 1w9j(A), 1w9k(A), 1w9l(A), 3mnq(A), 6z7t(A), 7b1a(A).
		3. Ligand: BIT × 5 (-)-1-Phenyl-1,2,3,4-Tetrahydro-4-Hydroxypyrrolo[2,3- B]-7-Methylquinolin-4-One PDB codes: 1yv3(A), 3mjx(A), 3myh(X), 3myk(X), 6z7u(A).
		4. Ligand: BL4 × 1 (3as)-3a-Hydroxy-5-Methyl-1-Phenyl-1,2,3,3a-Tetrahydro- 4h-Pyrrolo[2,3-B]quinolin-4-One PDB code: 3bz7(A).
		5. Ligand: BL6 × 1 (3as)-3a-Hydroxy-7-Methyl-1-Phenyl-1,2,3,3a-Tetrahydro- 4h-Pyrrolo[2,3-B]quinolin-4-One PDB code: 3bz8(A).
		6. Ligand: BL7 × 1 (3as)-3a-Hydroxy-1-Phenyl-1,2,3,3a-Tetrahydro-4h- Pyrrolo[2,3-B]quinolin-4-One PDB code: 3bz9(A).
		7. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 7b19(A).

Cluster 3 contains 8 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4pjk(A).
		2. Ligand: EDO × 7 1,2-Ethanediol PDB codes: 1w9i(A), 1w9j(A), 1w9k(A), 1w9l(A), 6z7u(A).
		3. Ligand: H70 × 1 2,4-Dichloro-6-(3,4,5-Tribromo-1h-Pyrrol-2-Yl)phenol PDB code: 2xo8(A).
		4. Ligand: IA2 × 1 2,4-Dichloro-6-(3,4,5-Trichloro-1h-Pyrrol-2yl)phenol PDB code: 2xel(A).
		5. Ligand: KI9 × 1 2,3,4,6,8-Pentachloro-9h-Carbazol-1-Ol PDB code: 2x9h(A).
		6. Ligand: MLI × 1 Malonate ion PDB code: 7b19(A).
		7. Ligand: PBQ × 1 Pentabromopseudilin PDB code: 2jhr(A).
		8. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 7b19(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: THR-ARG-LEU-VAL-PRO-ARG × 1 PDB code: 2aka(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GDP × 1 Guanosine-5'-Diphosphate PDB code: 1jwy(A).

Cluster 6 contains 3 ligand types

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Ligand		Description
		1. Ligand: BGC × 2 Beta-D-Glucopyranose PDB codes: 1jwy(A), 1jx2(A).
		2. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 1w9i(A), 1w9k(A).
		3. Ligand: MLI × 1 Malonate ion PDB code: 7b19(A).