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Ligand clusters for UniProt code P08661

Ligand clusters for P08661: Mannose-binding protein C OS=Rattus norvegicus GN=Mbl2 PE=1 SV=2

4 ligand clusters
Cluster 1.
8 ligand types
23 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
10 ligands
Cluster 4.
1 ligand type
12 ligands
Representative protein: 1kza1  
JSmol
 

Structures

PDB   Schematic diagram
1kza1    
1rdi1    
1kzd1    
1rdk1    
1rdj1    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: NAG × 1
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB code: 1kzd(1).

_Ca
 
2. Metal: _CA × 12
PDB codes: 1kza(1), 1kzb(1), 1kzc(1), 1kzd(1), 1kze(1), 1rdi(1), 1rdj(1), 1rdk(1), 1rdl(1), 1rdm(1), 1rdn(1), 1rdo(1).


 
3. Ligand: MAN × 4
Alpha-D-Mannose
PDB codes: 1kza(1), 1kzb(1), 1kzc(1), 1kze(1).


 
4. Ligand: MMA × 2
O1-Methyl-Mannose
PDB codes: 1rdl(1), 1rdm(1).


 
5. Ligand: GAL × 1
Beta-D-Galactose
PDB code: 1rdk(1).


 
6. Ligand: MFB × 1
Beta-L-Methyl-Fucose
PDB code: 1rdj(1).


 
7. Ligand: MFU × 1
Alpha-L-Methyl-Fucose
PDB code: 1rdi(1).


 
8. Ligand: NDG × 1
2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose
PDB code: 1rdn(1).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MMA × 1
O1-Methyl-Mannose
PDB code: 1rdm(1).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 10
PDB codes: 1kza(1), 1kzc(1), 1kze(1), 1rdi(1), 1rdj(1), 1rdk(1), 1rdl(1), 1rdm(1), 1rdn(1), 1rdo(1).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 12
PDB codes: 1kza(1), 1kzb(1), 1kzc(1), 1kzd(1), 1kze(1), 1rdi(1), 1rdj(1), 1rdk(1), 1rdl(1), 1rdm(1), 1rdn(1), 1rdo(1).

 

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