Ligand clusters for UniProt code P08648

Ligand clusters for P08648: Integrin alpha-5 OS=Homo sapiens GN=ITGA5 PE=1 SV=2

		Top 6 (of 11) ligand clusters Cluster 1. 4 ligand types 6 ligands Cluster 2. 2 ligand types 6 ligands Cluster 3. 4 ligand types 6 ligands Cluster 4. 3 ligand types 4 ligands Cluster 5. 2 ligand types 5 ligands Cluster 6. 3 ligand types 6 ligands
Representative protein: 3vi3A

Structures

PDB		Schematic diagram
3vi3A
3vi4A
4wk0A
4wk4A
4wjkA
		more ...

Cluster 1 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG × 2 n-acetyl-d-glucosamine N-Acetyl-D-Glucosamine PDB codes: 3vi3(A), 3vi4(A).
		2. Ligand: NAG-NAG-BMA-MAN × 2 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB codes: 4wk2(A), 4wk4(A).
		3. Ligand: NAG-NAG × 1 NAG=N-Acetyl-D-Glucosamine. PDB code: 4wk0(A).
		4. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB code: 4wjk(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG-NAG-BMA-MAN-MAN-MAN × 5 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB codes: 3vi3(A), 3vi4(A), 4wjk(A), 4wk0(A), 4wk4(A).
		2. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB code: 4wk2(A).

Cluster 3 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetyl-d-glucosamine N-Acetyl-D-Glucosamine PDB codes: 3vi3(A), 3vi4(A), 4wk0(A).
		2. Ligand: NAG-NAG × 1 NAG=N-Acetyl-D-Glucosamine. PDB code: 4wk2(A).
		3. Ligand: NAG-NAG-BMA × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose. PDB code: 4wjk(A).
		4. Ligand: NAG-NAG-BMA-MAN × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB code: 4wk4(A).

Cluster 4 contains 3 ligand types

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Ligand		Description
		1. Ligand: ARG-GLY-ASP × 2 PDB codes: 3vi4(A), 4wk0(A).
		2. Ligand: ALA-CYS-ARG-GLY-ASP-GLY-TRP-CYS × 1 PDB code: 4wk4(A).
		3. Ligand: GLY-ARG-GLY-ASP-SER-PRO × 1 PDB code: 4wk2(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 4 n-acetyl-d-glucosamine N-Acetyl-D-Glucosamine PDB codes: 3vi3(A), 3vi4(A), 4wk0(A), 4wk2(A).
		2. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB code: 4wk4(A).

Cluster 6 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetyl-d-glucosamine N-Acetyl-D-Glucosamine PDB code: 3vi3(A).
		2. Ligand: NAG-NAG × 4 NAG=N-Acetyl-D-Glucosamine. PDB codes: 3vi4(A), 4wjk(A), 4wk0(A), 4wk2(A).
		3. Ligand: NAG-NAG-BMA × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose. PDB code: 4wk4(A).