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Ligand clusters for UniProt code P05373

Ligand clusters for P05373: Delta-aminolevulinic acid dehydratase from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

3 ligand clusters
Cluster 1.
11 ligand types
21 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Representative protein: 1h7rA  
JSmol
 

Structures

PDB   Schematic diagram
1h7rA    
1gjpA    
1h7pA    
1ohlA    
1eb3A    
 more ...

 

 Cluster 1 contains 11 ligand types

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Ligand Description


 
1. Ligand: PBG × 1
3-[5-(Aminomethyl)-4-(Carboxymethyl)-1h-Pyrrol-3- Yl]propanoic acid
PDB code: 1ohl(A).

_Zn
 
2. Metal: _ZN × 10
PDB codes: 1aw5(A), 1eb3(A), 1gjp(A), 1h7n(A), 1h7o(A), 1h7p(A), 1h7r(A), 1ohl(A), 1w31(A), 1ylv(A).


 
3. Ligand: SHF × 2
Laevulinic acid
PDB codes: 1h7n(A), 1ylv(A).


 
4. Ligand: DAV × 1
Delta-Amino valeric acid
PDB code: 1h7o(A).


 
5. Ligand: KAH × 1
5-Amino-4-Hydroxyhexanoic acid
PDB code: 1h7p(A).


 
6. Ligand: SHO × 1
5-Hydroxylaevulinic acid
PDB code: 1w31(A).


 
7. Ligand: SHU × 1
4,6-Dioxoheptanoic acid
PDB code: 1h7r(A).


 
8. Ligand: 4OX × 1
4-Oxodecanedioic acid
PDB code: 1gjp(A).


 
9. Ligand: DSB × 1
4,7-Dioxosebacic acid
PDB code: 1eb3(A).

_Hg
 
10. Metal: _HG × 1
PDB code: 1qml(A).

_Pb
 
11. Metal: _PB × 1
PDB code: 1qnv(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 1ohl(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 1aw5(A).

 

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