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Ligand clusters for UniProt code P03407

Ligand clusters for P03407: Protein Nef from Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)

Top 6 (of 7) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3rbbA  
JSmol
 

Structures

PDB   Schematic diagram
3rbbA    
3rbbC    
6b72A    
4u5wA    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: BOG × 1
Octyl beta-D-Glucopyranoside
PDB code: 6b72(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 4u5w(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 4u5w(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 4u5w(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3rbb(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3rbb(A).

 

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