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EBI
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Ligand clusters for UniProt code P03070
Ligand clusters for P03070: Large T antigen from Simian virus 40
5 ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
7 ligands
Representative protein: 4gdfA
Structures
PDB
Schematic diagram
4gdf
A
1svl
A
5tct
A
1n25
A
1svo
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
1svl
(A),
1svm
(A).
2. Ligand:
ADP × 2
Adenosine-5'-Diphosphate
PDB codes:
1svl
(A),
5tct
(A).
3. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
1svm
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 1
PDB code:
5tct
(A).
2. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
5tct
(A).
3. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
1svm
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
FLC × 2
Citrate anion
PDB codes:
2fuf
(A),
3qn2
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5d9i
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 7
PDB codes:
1n25
(A),
1svl
(A),
1svm
(A),
1svo
(A),
4e2i
(A),
4gdf
(A),
5tct
(A).