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Ligand clusters for UniProt code P02675

Ligand clusters for P02675: Fibrinogen beta chain from Homo sapiens

1 ligand cluster
Cluster 1.
14 ligand types
45 ligands
Representative protein: 3ghgB  
JSmol
 

Structures

PDB   Schematic diagram
3ghgB    
2hloB    
1fzeB    
2hodB    
1fzaB    
 more ...

 

 Cluster 1 contains 14 ligand types

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Ligand Description


 
1. Ligand: NAG × 10
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 1fza(B), 1fzb(B), 1fze(B), 1fzf(B), 1lt9(B), 1re4(B), 1rf0(B), 2hod(B), 2hpc(B), 3e1i(B).


 
2. Ligand: GLY-HIS-ARG-PRO × 8
PDB codes: 1fzc(B), 1fzf(B), 1fzg(B), 1ltj(B), 1n86(B), 1rf1(B), 2oyh(B), 3ghg(B).


 
3. Ligand: NAG-NAG × 7
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 1fzc(B), 1fzg(B), 1re3(B), 2h43(B), 2hlo(B), 2q9i(B), 2z4e(B).


 
4. Ligand: NAG-NAG-FUC × 7
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 1ltj(B), 1rf1(B), 2ffd(B), 2oyh(B), 2oyi(B), 3bvh(B), 3hus(B).


 
5. Ligand: GLY-PRO-ARG-PRO × 3
PDB codes: 2oyi(B), 3bvh(B), 3hus(B).


 
6. Ligand: GLY-HIS-ARG-PRO-TYR × 2
PDB codes: 2z4e(B), 3h32(B).


 
7. Ligand: ALA-HIS-ARG-PRO-NH2 × 1
NH2=Amino group.
PDB code: 2h43(B).


 
8. Ligand: GLY-HYP-ARG-PRO-NH2 × 1
HYP=4-Hydroxyproline, NH2=Amino group.
PDB code: 2hod(B).


 
9. Ligand: GLY-PRO-ARG-PRO-NH2 × 1
NH2=Amino group.
PDB code: 2hpc(B).


 
10. Ligand: GLY-PRO-ARG-VAL × 1
PDB code: 2ffd(B).


 
11. Ligand: MET-HIS-ARG-PRO-TYR × 1
PDB code: 2q9i(B).


 
12. Ligand: NAG-NAG-MAN-MAN-NAG-GAL-SIA-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose, GAL=Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3h32(B).


 
13. Ligand: NAG-NDG-BMA-MAN-NDG-GAL-SIA-MAN-NDG-GAL-SIA × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, NDG=2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, GAL=Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3ghg(B).


 
14. Ligand: NDG × 1
2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose
PDB code: 1n86(B).

 

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