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PDBsum
Ligand clusters for UniProt code P01130
Ligand clusters for P01130: Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Top 6 (of 22) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1n7dA
Structures
PDB
Schematic diagram
1n7d
A
3p5b
L
1i0u
A
2fcw
B
2w2p
E
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
2fcw
(B).
2. Ligand:
NAG-NAG-BMA-MAN-MAN × 1
NAG
=N-Acetyl-D-Glucosamine,
BMA
=Beta-D-Mannose,
MAN
=Alpha-D-Mannose.
PDB code:
1n7d
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
KEG × 1
12-Tungstophosphate
PDB code:
1n7d
(A).
2. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
2fcw
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
KEG × 1
12-Tungstophosphate
PDB code:
1n7d
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
KEG × 1
12-Tungstophosphate
PDB code:
1n7d
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG-NAG-BMA-MAN × 1
NAG
=N-Acetyl-D-Glucosamine,
BMA
=Beta-D-Mannose,
MAN
=Alpha-D-Mannose.
PDB code:
1n7d
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
2fcw
(B).