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Ligand clusters for UniProt code O00834

Ligand clusters for O00834: Micronemal protein 1 OS=Toxoplasma gondii GN=MIC1 PE=1 SV=1

Top 6 (of 18) ligand clusters
Cluster 1.
5 ligand types
6 ligands
Cluster 2.
2 ligand types
10 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
5 ligands
Cluster 5.
2 ligand types
12 ligands
Cluster 6.
1 ligand type
5 ligands
Representative protein: 2jh1A  
JSmol
 

Structures

PDB   Schematic diagram
2jh1A    
2jhdA    
3f5aA    
3f53A    
2jh7A    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: ACT × 1
acetic acid
Acetate ion
PDB code: 2jh1(A).


 
2. Ligand: SIA-GAL × 2
SIA=O-Sialic acid, GAL=Beta-D-Galactose.
PDB codes: 2jh7(A), 2jhd(A).


 
3. Ligand: SIA-2FG × 1
SIA=O-Sialic acid, 2FG=2-Fluoro-2-Deoxy-Beta-D-Galactopyranose.
PDB code: 3f53(A).


 
4. Ligand: SIA-2FG-NAG × 1
SIA=O-Sialic acid, 2FG=2-Fluoro-2-Deoxy-Beta-D-Galactopyranose, NAG=N-Acetyl-D-Glucosamine.
PDB code: 3f5e(A).


 
5. Ligand: SIA-GAL-NAG × 1
SIA=O-Sialic acid, GAL=Beta-D-Galactose, NAG=N-Acetyl-D-Glucosamine.
PDB code: 3f5a(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 4
acetic acid
Acetate ion
PDB codes: 2jh1(A), 2jh7(A), 2jhd(A).


 
2. Ligand: GOL × 6
Glycerol
PDB codes: 3f53(A), 3f5a(A), 3f5e(A),

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 2
acetic acid
Acetate ion
PDB codes: 2jh1(A), 2jh7(A).


 
2. Ligand: GOL × 1
Glycerol
PDB code: 2jh1(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 1
acetic acid
Acetate ion
PDB code: 2jh7(A).


 
2. Ligand: GOL × 4
Glycerol
PDB codes: 2jhd(A), 3f53(A), 3f5a(A), 3f5e(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 6
Glycerol
PDB codes: 2jh1(A), 2jh7(A), 2jhd(A), 3f53(A), 3f5a(A), 3f5e(A).

_Cl
 
2. Metal: _CL × 6
PDB codes: 2jh1(A), 2jh7(A), 2jhd(A), 3f53(A), 3f5a(A), 3f5e(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 5
Glycerol
PDB codes: 2jh7(A), 2jhd(A), 3f53(A), 3f5a(A), 3f5e(A).

 

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