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EBI
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Ligand clusters for UniProt code O00834
Ligand clusters for O00834: Micronemal protein 1 OS=Toxoplasma gondii GN=MIC1 PE=1 SV=1
Top 6 (of 18) ligand clusters
Cluster 1.
5 ligand types
6 ligands
Cluster 2.
2 ligand types
10 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
5 ligands
Cluster 5.
2 ligand types
12 ligands
Cluster 6.
1 ligand type
5 ligands
Representative protein: 2jh1A
Structures
PDB
Schematic diagram
2jh1
A
2jhd
A
3f5a
A
3f53
A
2jh7
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
ACT × 1
acetic acid
Acetate ion
PDB code:
2jh1
(A).
2. Ligand:
SIA-GAL × 2
SIA
=O-Sialic acid,
GAL
=Beta-D-Galactose.
PDB codes:
2jh7
(A),
2jhd
(A).
3. Ligand:
SIA-2FG × 1
SIA
=O-Sialic acid,
2FG
=2-Fluoro-2-Deoxy-Beta-D-Galactopyranose.
PDB code:
3f53
(A).
4. Ligand:
SIA-2FG-NAG × 1
SIA
=O-Sialic acid,
2FG
=2-Fluoro-2-Deoxy-Beta-D-Galactopyranose,
NAG
=N-Acetyl-D-Glucosamine.
PDB code:
3f5e
(A).
5. Ligand:
SIA-GAL-NAG × 1
SIA
=O-Sialic acid,
GAL
=Beta-D-Galactose,
NAG
=N-Acetyl-D-Glucosamine.
PDB code:
3f5a
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACT × 4
acetic acid
Acetate ion
PDB codes:
2jh1
(A),
2jh7
(A),
2jhd
(A).
2. Ligand:
GOL × 6
Glycerol
PDB codes:
3f53
(A),
3f5a
(A),
3f5e
(A),
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACT × 2
acetic acid
Acetate ion
PDB codes:
2jh1
(A),
2jh7
(A).
2. Ligand:
GOL × 1
Glycerol
PDB code:
2jh1
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACT × 1
acetic acid
Acetate ion
PDB code:
2jh7
(A).
2. Ligand:
GOL × 4
Glycerol
PDB codes:
2jhd
(A),
3f53
(A),
3f5a
(A),
3f5e
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 6
Glycerol
PDB codes:
2jh1
(A),
2jh7
(A),
2jhd
(A),
3f53
(A),
3f5a
(A),
3f5e
(A).
_Cl
2. Metal:
_CL × 6
PDB codes:
2jh1
(A),
2jh7
(A),
2jhd
(A),
3f53
(A),
3f5a
(A),
3f5e
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 5
Glycerol
PDB codes:
2jh7
(A),
2jhd
(A),
3f53
(A),
3f5a
(A),
3f5e
(A).