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Ligand clusters for UniProt code M4STU1

Ligand clusters for M4STU1: ORF1ab protein OS=Human betacoronavirus 2c Jordan-N3/2012 OX=1306931 GN=ORF1ab PE=1 SV=1

Top 6 (of 17) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
4 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 4rf1A  
JSmol
 

Structures

PDB   Schematic diagram
4rf1A    
4rezA    
5w8tA    
5w8uA    
4rf0A    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: PGO × 3
S-1,2-Propanediol
PDB codes: 4rez(A), 4rf1(A),


 
2. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 5w8u(A).


 
3. Ligand: SO4 × 1
Sulfate ion
PDB code: 4rf0(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 5w8t(A), 5w8u(A).


 
2. Ligand: PGO × 1
S-1,2-Propanediol
PDB code: 4rf1(A).


 
3. Ligand: SO4 × 1
Sulfate ion
PDB code: 4rf0(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: PGO × 1
S-1,2-Propanediol
PDB code: 4rez(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 4rf0(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: PGO × 1
S-1,2-Propanediol
PDB code: 4rf1(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 4rf0(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: 3CN × 2
3-Aminopropane
PDB codes: 4rf0(A), 4rf1(A).


 
2. Ligand: AYE × 2
Prop-2-En-1-Amine
PDB codes: 5w8t(A), 5w8u(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 5w8t(A), 5w8u(A).

 

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