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Ligand clusters for UniProt code G0SDW4

Ligand clusters for G0SDW4: Uncharacterized protein OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=CTHT_0053230 PE=1 SV=1

6 ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
30 ligands
Cluster 4.
1 ligand type
30 ligands
Cluster 5.
1 ligand type
10 ligands
Cluster 6.
1 ligand type
10 ligands
Representative protein: 5kklB  
JSmol
 

Structures

PDB   Schematic diagram
5kklB    
5bjsB    
5vk3B    
5tqrB    
5kjiB    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: SAM × 2
ademetionine
S-Adenosylmethionine
PDB codes: 5kkl(B), 5tqr(B).


 
2. Ligand: SAH × 3
S-Adenosyl-L-Homocysteine
PDB codes: 5kjh(B), 5kji(B), 5m5g(B).


 
3. Ligand: A9G × 2
1-[(2s)-Butan-2-Yl]-N-[(4,6-Dimethyl-2-Oxo-1,2- Dihydropyridin-3-Yl)methyl]-3-Methyl-6-[6-
(Piperazin- 1-Yl)pyridin-3-Yl]-1h-Indole-4-Carboxamide
PDB codes: 5wf7(B), 5wfd(B).


 
4. Ligand: A97 × 1
N-[(6-Methyl-2-Oxo-4-Propyl-1,2-Dihydropyridin-3-Yl) methyl]-6-[2-(4-Methylpiperazin-1-Yl)pyridin-
4-Yl]-1- (Propan-2-Yl)-1h-Indazole-4-Carboxamide
PDB code: 5wfc(B).


 
5. Ligand: VAL-MET-LEU-PRO-GLY-ARG-GLY-VAL-PRO × 1
PDB code: 5m5g(B).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: LYS-ALA-ALA-ARG-M3L-SER-ALA-PRO × 2
M3L=N-Trimethyllysine.
PDB codes: 5kjh(B), 5m5g(B).


 
2. Ligand: ALA-ALA-ARG-M3L-SER-ALA-PRO-ALA × 1
M3L=N-Trimethyllysine.
PDB code: 5kkl(B).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 30
PDB codes: 5bjs(B), 5kjh(B), 5kji(B), 5kkl(B), 5m5g(B), 5tqr(B), 5vk3(B), 5wf7(B), 5wfc(B), 5wfd(B),

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 30
PDB codes: 5bjs(B), 5kjh(B), 5kji(B), 5kkl(B), 5m5g(B), 5tqr(B), 5vk3(B), 5wf7(B), 5wfc(B), 5wfd(B),

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 10
PDB codes: 5bjs(B), 5kjh(B), 5kji(B), 5kkl(B), 5m5g(B), 5tqr(B), 5vk3(B), 5wf7(B), 5wfc(B), 5wfd(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 10
PDB codes: 5bjs(B), 5kjh(B), 5kji(B), 5kkl(B), 5m5g(B), 5tqr(B), 5vk3(B), 5wf7(B), 5wfc(B), 5wfd(B).

 

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