Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code F8RC03
Ligand clusters for F8RC03: Methionyl-tRNA formyltransferase OS=Providencia alcalifaciens GN=qdtf PE=4 SV=1
Top 6 (of 17) ligand clusters
Cluster 1.
4 ligand types
7 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 4xczA
Structures
PDB
Schematic diagram
4xcz
A
4xd0
A
4xd1
A
Cluster 1 contains 4 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
FON × 3
N-{[4-({[(6r)-2-Amino-5-Formyl-4-Oxo-1,4,5,6,7,8- Hexahydropteridin-6-
Yl]methyl}amino)phenyl]carbonyl}- L-Glutamic acid
PDB codes:
4xcz
(A),
4xd0
(A),
4xd1
(A).
2. Ligand:
T3Q × 2
[(3r,4s,5s,6r)-4-Amino-3,5-Dihydroxy-6-Methyloxan-2- Yl][hydroxy-[[(2r,3s,5r)-3-Hydroxy-5-(5-
Methyl-2,4- Dioxopyrimidin-1-Yl)oxolan-2-Yl]methoxy]phosphoryl] hydrogen phosphate
PDB codes:
4xcz
(A),
4xd1
(A).
3. Ligand:
T3F × 1
(3r,4s,5r,6r)-4-Amino-3,5-Dihydroxy-6-Methyloxan-2- Yl][hydroxy-[[(2r,3s,5r)-3-Hydroxy-5-(5-Methyl-
2,4- Dioxopyrimidin-1-Yl)oxolan-2-Yl]methoxy]phosphoryl] hydrogen phosphate
PDB code:
4xd0
(A).
_Cl
4. Metal:
_CL × 1
PDB code:
4xd1
(A).
Cluster 2 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
T3F × 1
(3r,4s,5r,6r)-4-Amino-3,5-Dihydroxy-6-Methyloxan-2- Yl][hydroxy-[[(2r,3s,5r)-3-Hydroxy-5-(5-Methyl-
2,4- Dioxopyrimidin-1-Yl)oxolan-2-Yl]methoxy]phosphoryl] hydrogen phosphate
PDB code:
4xd0
(A).
2. Ligand:
T3Q × 1
[(3r,4s,5s,6r)-4-Amino-3,5-Dihydroxy-6-Methyloxan-2- Yl][hydroxy-[[(2r,3s,5r)-3-Hydroxy-5-(5-
Methyl-2,4- Dioxopyrimidin-1-Yl)oxolan-2-Yl]methoxy]phosphoryl] hydrogen phosphate
PDB code:
4xcz
(A).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
4xcz
(A),
4xd1
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4xcz
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
4xcz
(A),
4xd1
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
4xcz
(A),
4xd1
(A).