Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code A2RJT9
Ligand clusters for A2RJT9: Dihydroorotate dehydrogenase A (fumarate) OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=pyrDA PE=1 SV=1
6 ligand clusters
Cluster 1.
5 ligand types
21 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
2 ligand types
5 ligands
Cluster 4.
1 ligand type
6 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
7 ligands
Representative protein: 1dorA
Structures
PDB
Schematic diagram
1dor
A
1ovd
A
1jrc
A
1jqv
A
1jub
A
more ...
Cluster 1 contains 5 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
FMN × 1
Flavin mononucleotide
PDB code:
2bx7
(A).
2. Ligand:
ACT × 2
acetic acid
Acetate ion
PDB codes:
2bsl
(A),
2bx7
(A).
3. Ligand:
FMN × 10
Flavin mononucleotide
PDB codes:
1dor
(A),
1jqv
(A),
1jqx
(A),
1jrb
(A),
1jrc
(A),
1jub
(A),
1jue
(A),
1ovd
(A),
2bsl
(A),
2dor
(A).
4. Ligand:
ORO × 6
Orotic acid
PDB codes:
1jqv
(A),
1jqx
(A),
1jrb
(A),
1jrc
(A),
1ovd
(A),
2dor
(A).
5. Ligand:
ACY × 2
Acetic acid
PDB codes:
1jqv
(A),
1jue
(A).
Cluster 2 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 4
Glycerol
PDB codes:
1jqx
(A),
1jub
(A),
1jue
(A),
1ovd
(A).
2. Ligand:
ACY × 1
Acetic acid
PDB code:
1jqv
(A).
Cluster 3 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 4
Glycerol
PDB codes:
1jqx
(A),
1jub
(A),
1jue
(A),
1ovd
(A).
2. Ligand:
ACY × 1
Acetic acid
PDB code:
1jqv
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 6
Glycerol
PDB codes:
2bx7
(A),
1jqx
(A),
1jub
(A),
1jue
(A),
1ovd
(A),
2bsl
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 3
Glycerol
PDB codes:
1jub
(A),
1jue
(A),
1ovd
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Mg
1. Metal:
_MG × 7
PDB codes:
1jqv
(A),
1jqx
(A),
1jub
(A),
1jue
(A),
1ovd
(A),
2bsl
(A),
2bx7
(A).