Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code A0FGR8
Ligand clusters for A0FGR8: Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 PE=1 SV=1
Top 6 (of 7) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 4p42A
Structures
PDB
Schematic diagram
4p42
A
4npk
A
4p42
B
4npj
A
Cluster 1 contains 2 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EGC × 1
2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-Tetramethyl- Butyl)-Phenoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-
Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol
PDB code:
4p42
(A).
2. Ligand:
PEE × 1
Phosphatidylethanolamine
PDB code:
4p42
(A).
Cluster 2 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EGC × 1
2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-Tetramethyl- Butyl)-Phenoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-
Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol
PDB code:
4p42
(B).
2. Ligand:
PEE × 1
Phosphatidylethanolamine
PDB code:
4p42
(B).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Cl
1. Metal:
_CL × 1
PDB code:
4npj
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Na
1. Metal:
_NA × 1
PDB code:
4npj
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Cl
1. Metal:
_CL × 1
PDB code:
4npj
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Ca
1. Metal:
_CA × 2
PDB codes:
4npk
(A),