Sequence alignment between 1kqs(H) and UniProt seq P60617 (RL10E_HALMA):

P60617 (RL10E_HALMA): Large ribosomal subunit protein uL16 from Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) 
                 10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       
         ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+-------
UniProt: MSDKPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRIKVERGEELLIA
         .....XX...XXX..........X....X....XX..XXXXXXXX..X.XX.X..XX..X..XX...X.XX...XXXXXX.XXXX..XXX....XX.X....XXXXXXXXXXX.....X...X.......XXXXXX.X.XX.XXXXXX.X..X...XX.X..XXX.XXXXXXXX...
PDB seq: ---KPGAMYRNSSKPAYTRREYISGIPGKKIAQFDMGNNGA-GPTYPAQVELVVEKPVQIRHNALEAARVAANRY-VQNSGAAANYKFRIRKFPFHVIRENK-----------DGMRAPFGKPVGTAARVHGANHIFIAWVNPDP--NVEEAWRRAKMKVTPTINIDSSPAGNA---
            ---------+---------+---------+-------- -+---------+---------+---------+- --------+---------+-------           -+---------+---------+---------+  ---------+---------+-------   
                    10        20        30         40        50        60        70         80        90                 110       120       130       140         150       160