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PDBsum entry 4z7n
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Ligand/metal interactions
PDB id
4z7n
2 instances of ligand highlighted
NAG
Ligands
ALA-GLY-ASP-VAL
×2
ALA 408(G) to VAL 411(G)
NAG-NAG-BMA-MAN-
MAN
NAG 1(I) to MAN 5(I)
NAG-NAG
×2
NAG 1(K) to NAG 2(K)
NAG-NAG-BMA-MAN
NAG 1(M) to MAN 4(M)
SO4
×8
SO4 505(A)
SO4 506(A)
SO4 507(A)
SO4 508(A)
SO4 501(C)
SO4 508(C)
SO4 301(L)
GOL
GOL 509(A)
NAG
×2
NAG 2004(B)
Metals
_CA
×8
CA 501(A)
CA 502(A)
CA 503(A)
CA 504(A)
_MN
×6
MN 2001(B)
MN 2002(B)
MN 2003(B)
_CL
CL 502(C)
Ligand
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 2004(B)
15
15
1
1
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG
List of
interactions
NAG 2004(B)
(also representing equivalent ligand NAG 2004(D) )
_CA
×8
_MN
×6
