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PDBsum entry 5o4e
Go to PDB code:
Ligand/metal interactions
PDB id
5o4e
10 instances of ligand highlighted
MPD
Ligands
NAG-NAG-BMA-MAN-
NAG-MAN-NAG-FUC
×2
NAG 1(G) to FUC 8(G)
NAG 1(H) to FUC 8(H)
MAN-NAG
MAN 1(I) to NAG 2(I)
NAG-NAG-BMA-MAN-
NAG-MAN
NAG 1(J) to MAN 6(J)
MPD
×10
MPD 509(A)
MPD 512(A)
MPD 503(C)
MPD 507(D)
MPD 508(D)
MPD 201(E)
MPD 202(E)
MRD
MRD 510(A)
CAC
×2
CAC 511(A)
CAC 203(E)
TRS
TRS 509(D)
Ligand
MPD
-
(4s)-2-Methyl-2,4-Pentanediol
Formula:
C
6
H
14
O
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
MPD 507(D)
8
8
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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of interactions involving ligand MPD
List of
interactions
MPD 507(D)
