Sequence alignment between 3oee(H) and UniProt seq Q12165 (ATPD_YEAST):

Q12165 (ATPD_YEAST): ATP synthase subunit delta, mitochondrial from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 
                 10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
         ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+
UniProt: MLRSIIGKSASRSLNFVAKRSYAEAAAASSGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSVLK
         .............................................XX.................................................................X......X........................................
PDB seq: --------------------------------KLQFALPHETLYS--EVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEA-PLESFS-ENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSV--
                                         ---------+---  ----+---------+---------+---------+---------+---------+---------+ ------ -+---------+---------+---------+------  
                                                 20        30        40        50        60        70        80        90       100       110       120       130