Sequence alignment between 2wpd(H) and UniProt seq Q12165 (ATPD_YEAST):

Q12165 (ATPD_YEAST): ATP synthase subunit delta, mitochondrial from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 
                 10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
         ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+
UniProt: MLRSIIGKSASRSLNFVAKRSYAEAAAASSGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSVLK
PDB seq: ----------------------------SSGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAREAAEAAIQVEVLENLQSVLK
                                     ---+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+--------
                                       10        20        30        40        50        60        70        80        90       100       110       120       130