Sequence alignment between 5a5b(V) and UniProt seq P43588 (RPN11_YEAST):

P43588 (RPN11_YEAST): Ubiquitin carboxyl-terminal hydrolase RPN11 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
                 10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      
         ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+------
UniProt: MERLQRLMMNSKVGSADTGRDDTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAKETKMLMNLHKEQWQSGLKMYDYEEKEESNLAATKSMVKIAEQYSKRIEEEKELTEEELKTRYVGRQDPKKHLSETADETLENNIVSVLTAGVNSVAIK
         ........................................................................................................................................................................XXXXXXXXXXX......................................XXXXXXXXXXXX........................................XXXXXX...............................
PDB seq: ----------------------TKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNL-----------LNKANIQALIHGLNRHYYSLNIDYHKTAKETKMLMNLH------------YEEKEESNLAATKSMVKIAEQYSKRIEEEKELTEEELKTR------PKKHLSETADETLENNIVSVLTA--------
                               -------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+--------           +---------+---------+---------+-------            +---------+---------+---------+---------      ----+---------+--------        
                                     30        40        50        60        70        80        90       100       110       120       130       140       150       160                 180       190       200       210                 230       240       250       260                 280       290