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PDBsum entry 5gmf
Go to PDB code:
Ligand/metal interactions
PDB id
5gmf
4 instances of ligand highlighted
GMP
Ligands
NAG-NAG
×6
NAG 1(I) to NAG 2(I)
NAG 1(J) to NAG 2(J)
NAG
×18
NAG 902(A)
NAG 907(A)
NAG 908(A)
NAG 910(B)
NAG 906(C)
NAG 907(C)
NAG 910(C)
NAG 908(D)
NAG 909(D)
GMP
×4
GMP 901(B)
GMP 901(C)
GMP 901(D)
Metals
_CA
×4
CA 901(A)
CA 903(D)
Ligand
GMP
-
Guanosine
Formula:
C
10
H
13
N
5
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GMP 901(B)
20
20
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GMP
List of
interactions
GMP 901(B)
_CA
×4
