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PDBsum entry 3d1f
Go to PDB code:
Ligand/metal interactions
PDB id
3d1f
2 instances of ligand highlighted
323
Ligands
SER-GLU-GLN-VAL-
GLU-LEU-GLU-PHE-
ASP
×2
SER 2(P) to ASP 10(P)
PEG
×2
PEG 367(A)
PEG 368(A)
323
×2
323 1(P)
Ligand
323
-
2-[3,6-Bis(dimethylamino)xanthen-9-Yl]-5-Methanoyl-
Benzoate
[5-Carboxy-N,N'-Tetramethyl rhodamine]
Formula:
C
25
H
22
N
2
O
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
323 1(P)
31
31
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand 323
List of
interactions
323 1(P)
(also representing equivalent ligand 323 1(Q) )
