Sequence alignment between 3qqc(A) and UniProt seq
Q8U0M5 (RPOA2_PYRFU):
Q8U0M5 (RPOA2_PYRFU):
DNA-directed RNA polymerase subunit Rpo1C from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390
---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+------ ---+---------+---------+---------+ ---------+---------+---------+---------+---------+---------+---------+---------+---------+--------- +---------+---------+-------- -+---------+---------+---------+---------+---------+-------
UniProt: ----------MVSLSTIKSLIEKKGANLPENVKSELYEKLKKYNEKYKLTKAEIEAIIDDVVKEYERALVEPGEPVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPMMTVYLDEEHRYDRAKAEEVARRIEGTTLENLARSTTLDLINFEFIVEIDPERLERSGLT--MEKVVKKLESSFKSAEFEVDGYTLIVRPKKADKI------SDLRRFAEKIKKHRLKGLSGVGKTIVRKEGDEYVIYTEGSNFKQVLKVPGVDPTRTRTNNIHEIAEVLGIEAARNAIIDEIVSTMQEQGLEVDIRHIML--VADMMTLDGIVRPIGRHGVVGEKSSVLAR--AAFEITVQHLFEAAEKGEVDNLNGVIENVLIGQPVPVGTGMVKLTMKLPLRPQKEKEEV
..........XXXXXXX.XXXXXXXXXXX.XXXXXXX.XXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX.XXXXX.XXXXXXXXXXXXXXXXXXXXXX.XXXX.XXXXXXXXXXXXXXXXXXXXXX.XXXX.XX.X.XX.XXX.XXXX.XXXX.XXXX.XXX.XX..XXXXXXXXXX..XXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXXXXX.XXX...XXXX.XX.X.XXXXXXX.XXX.XXXX.XXXXXXX.XXX.XXXXX.XXXXXX.XXXXXXX.XXXX.XXXXXXXXXXXX.XXXX.XXXXXXXX.XXXXXXXXXXX.XXX.XXX.XXXXX..XXXXX.........................................................
PDB seq: KTEVWVCENCGHIALEDKRRRRVYCPVCGEEERISKVEMSYAFKLLLDELKAMVIRPKLNLSEKVIGSIEFGILSPQEIRKMSAVEVTVPDTYDPIEGGVMDKRMGVIDPGLRCETCGGRAGECPGHFGHIELARPVIHVGFAKTIYRILESTCREC-GRIKLTDEEIEEYMKKIELARNRRSEFNEIIKEIHKKAKERMVCPPIKFEKPTIYWEIRKDNEYRHRLMPTEVRDWLEKIPDKDLP-LLGLDP---EKSRPEWMVLTVLP-VPPVTARPSITLIRAEDDLTHKLVDIIRI----NNRLKQNIEAGAPQLIIEDLWDLLQYHVTTYINNEAPGVPPAKHKS-GRPLKTLAQRLKGFEITVQHLFEAAEKGEVDNLNGVIENVLIG---------------------------
--------+---------+---------+---------+---------+---------+-------+---------+---------+---------------+---------+---------+---------+---------+---------+---- -----+---------+---------+---------+------------+---------+------+---------+---------+ ------ ---+---------+ ---------+------+---------+-- -------+---------+---------+---------+-------- -+---------+----+---------+---------+------
10 20 30 40 50 60 70 80 90 110 120 130 140 150 160 170 180 190 200 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 410 420 430