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PDBsum entry 4z88
Go to PDB code:
Ligand/metal interactions
PDB id
4z88
Ligand highlighted
ARG-ARG-LYS-LEU-
PRO-GLU-ILE-PRO
Ligands
LEU-PRO-GLU-ILE-
PRO
LEU 155(N) to PRO 159(N)
ARG-ARG-LYS-LEU-
PRO-GLU-ILE-PRO
ARG 152(P) to PRO 159(P)
ARG-LYS-LEU-PRO-
GLU-ILE-PRO
ARG 153(R) to PRO 159(R)
ARG-ARG-LYS-LEU-
PRO
ARG 152(T) to PRO 156(T)
ARG-ARG-LYS-LEU-
PRO-GLU-ILE
×2
ARG 152(V) to ILE 158(V)
ARG 152(X) to ILE 158(X)
PO4
×11
PO4 1401(A)
PO4 1401(F)
PO4 1401(G)
PO4 1401(H)
PO4 1401(J)
PO4 1401(K)
PO4 1401(L)
Ligand
ARG-ARG-LYS-LEU-PRO-GLU-ILE-PRO
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ARG 152(P)
12
12
1
1
0
0
0
0
0
0
ARG 153(P)
12
12
1
1
0
0
0
0
0
0
LYS 154(P)
10
10
1
1
0
0
0
0
0
0
LEU 155(P)
9
9
1
1
0
0
0
0
0
0
PRO 156(P)
8
8
1
1
0
0
0
0
0
0
GLU 157(P)
10
10
1
1
0
0
0
0
0
0
ILE 158(P)
9
9
1
1
0
0
0
0
0
0
PRO 159(P)
8
7
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
ARG 152(P)
O: OXT
1
ARG 153(P)
O: OXT
1
LYS 154(P)
-
0
LEU 155(P)
O: OXT
1
PRO 156(P)
-
0
GLU 157(P)
-
0
ILE 158(P)
-
0
PRO 159(P)
-
0
Additional Information
Validation carried out using
MotiveValidator
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Validator
DB
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3D Viewers:
LIGPLOT
of interactions involving ligand ARG-ARG-LYS-LEU-PRO-GLU-ILE-PRO
List of
interactions
ARG 152(P) to PRO 159(P)
