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PDBsum entry 3t5o
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Ligand/metal interactions
PDB id
3t5o
Ligand highlighted
FUC-BGC
Ligands
NAG-NAG
NAG 1(B) to NAG 2(B)
FUC-BGC
FUC 1(C) to BGC 2(C)
FUL
FUL 1004(A)
MAN
×4
MAN 1007(A)
MAN 1008(A)
MAN 1009(A)
MAN 1010(A)
Metals
_CD
CD 1001(A)
Ligand
FUC-BGC
FUC
-
Alpha-L-Fucopyranose [Alpha-L-Fucose; 6-Deoxy-Alpha-L-Galactopyranose; l- Fucose; fucose]
Formula:
C
6
H
12
O
5
BGC
-
Beta-D-Glucopyranose [Beta-D-Glucose; d-Glucose; glucose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
FUC 1(C)
11
11
1
0
Complete
Chiral checks - OK
BGC 2(C)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand FUC-BGC
List of
interactions
FUC 1(C) to BGC 2(C)
_CD
