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PDBsum entry 3p4f
Go to PDB code:
Ligand/metal interactions
PDB id
3p4f
Ligand highlighted
GLY-ALA-ALA-ARG-
ALA-GLU-VAL-HIS-
LEU
Ligands
GLU-GLU-VAL-ASP-
VAL-THR-SER-VAL-
TYR
GLU 373(B) to TYR 381(B)
GLY-ALA-ALA-ARG-
ALA-GLU-VAL-HIS-
LEU
GLY 3762(C) to LEU 3770(C)
Ligand
GLY-ALA-ALA-ARG-ALA-GLU-VAL-HIS-LEU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLY 3762(C)
5
-
-
-
-
-
-
-
-
-
ALA 3763(C)
6
-
-
-
-
-
-
-
-
-
ALA 3764(C)
6
-
-
-
-
-
-
-
-
-
ARG 3765(C)
12
12
1
1
0
0
0
0
0
0
ALA 3766(C)
6
-
-
-
-
-
-
-
-
-
GLU 3767(C)
10
10
1
1
0
0
0
0
0
0
VAL 3768(C)
8
8
1
1
0
0
0
0
0
0
HIS 3769(C)
11
6
1
1
5
1
-
-
-
-
LEU 3770(C)
9
5
0
0
4
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
GLY 3762(C)
-
0
ALA 3763(C)
-
0
ALA 3764(C)
-
0
ARG 3765(C)
O: OXT
1
ALA 3766(C)
-
0
GLU 3767(C)
-
0
VAL 3768(C)
-
0
HIS 3769(C)
-
0
LEU 3770(C)
O: OXT
1
Additional Information
Validation carried out using
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Validator
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LIGPLOT
of interactions involving ligand GLY-ALA-ALA-ARG-ALA-GLU-VAL-HIS-LEU
List of
interactions
GLY 3762(C) to LEU 3770(C)
