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PDBsum entry 3l2v
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Ligand/metal interactions
PDB id
3l2v
Ligand highlighted
RLT
Ligands
NH4
NH4 396(A)
RLT
RLT 397(A)
GOL
×4
GOL 801(A)
GOL 802(A)
GOL 803(A)
GOL 804(A)
Metals
_MN
×3
MN 393(B)
MN 394(A)
MN 395(A)
_ZN
ZN 393(A)
Ligand
RLT
-
N-(4-Fluorobenzyl)-5-Hydroxy-1-Methyl-2-(1-Methyl-1- {[(5-
Methyl-1,3,4-Oxadiazol-2-Yl) carbonyl]amino}ethyl)-6-Oxo-
1,6-Di hydropyrimidine-4- Carboxamide
[Raltegravir, Mk0518]
Formula:
C
20
H
21
FN
6
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
RLT 397(A)
32
32
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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LIGPLOT
of interactions involving ligand RLT
List of
interactions
RLT 397(A)
_MN
×3
_ZN
